Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007992.1 Corchorus capsularis cultivar CVL-1 contig08013, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13824

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3226--3266
7
5.9
7
86
13
50
58
4
0
36
1.20
3207--3264
25
2.2
25
81
9
62
53
8
0
37
1.32
3300--3387
33
2.7
33
74
8
92
11
36
34
18
1.86
3292--3408
32
3.6
31
74
10
94
12
35
30
20
1.90
4249--4314
33
2.0
33
100
0
132
21
15
21
42
1.89
4257--4327
33
2.2
33
86
0
97
22
16
23
36
1.94
4556--4660
32
3.3
32
82
2
113
36
35
19
9
1.84
4564--4650
16
5.4
16
73
10
79
35
35
18
10
1.85
4589--4658
16
4.4
16
76
7
70
38
37
17
7
1.77
5179--5260
42
2.0
42
95
0
146
39
18
4
37
1.72
5696--5769
16
4.6
16
77
14
64
25
36
25
12
1.91
8024--8058
2
18.0
2
94
5
63
51
0
0
48
1.00
13374--13429
27
2.1
27
100
0
112
28
17
14
39
1.89

Tables:   1

The End!