Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008001.1 Corchorus capsularis cultivar CVL-1 contig08022, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20322

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3954--3980
2
13.5
2
100
0
54
51
0
0
48
1.00
9103--9135
2
16.5
2
87
12
50
3
51
0
45
1.16
10511--10570
30
2.0
30
90
0
93
31
16
5
46
1.69
10457--10714
136
1.9
135
91
3
419
29
17
5
48
1.70
19380--19569
67
3.0
64
84
14
279
44
17
21
16
1.86
19444--19564
58
2.1
58
95
3
217
42
18
22
17
1.89

Tables:   1

The End!