Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008003.1 Corchorus capsularis cultivar CVL-1 contig08024, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56667

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4913--4948
19
1.9
18
88
5
54
33
22
2
41
1.68
11237--11747
266
1.9
265
89
2
794
28
11
16
43
1.84
14305--14367
30
2.1
30
91
5
101
30
17
33
19
1.95
20533--20574
21
2.0
21
90
4
66
40
14
16
28
1.88
21926--21961
19
1.9
18
88
5
54
30
22
5
41
1.76
29957--29983
14
1.9
14
100
0
54
37
3
7
51
1.48
38603--38634
6
5.3
6
100
0
64
31
15
0
53
1.43
41447--41476
13
2.2
14
94
5
53
30
6
10
53
1.60

Tables:   1

The End!