Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008006.1 Corchorus capsularis cultivar CVL-1 contig08027, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41392

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5067--5108
22
1.9
22
90
9
68
7
21
4
66
1.35
6074--6427
189
1.9
190
95
0
638
36
13
18
30
1.90
7909--7951
20
2.2
20
100
0
86
46
9
34
9
1.68
14018--14157
30
4.5
31
77
13
117
30
25
23
20
1.98
20132--21437
440
3.0
434
84
4
1694
42
17
13
27
1.86
37237--37291
27
2.0
27
100
0
110
29
18
10
41
1.84

Tables:   1

The End!