Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008013.1 Corchorus capsularis cultivar CVL-1 contig08034, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23622

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2841--2868
1
28.0
1
100
0
56
0
0
0
100
0.00
4947--5275
165
2.0
167
83
2
421
30
13
16
39
1.87
15274--15333
31
1.9
31
89
0
93
38
11
15
35
1.83
15362--15440
37
2.1
38
88
4
115
36
8
17
36
1.81
16120--16158
19
2.1
19
95
0
69
35
15
28
20
1.93
16635--16698
31
2.0
32
87
3
94
37
6
20
35
1.78
17801--17860
31
1.9
31
89
0
93
38
11
15
35
1.83
17889--17967
37
2.1
38
90
4
124
35
8
18
36
1.83
19688--19740
27
2.0
26
96
3
97
15
18
37
28
1.91
20928--20981
28
1.9
28
92
0
90
29
22
16
31
1.96
22907--22943
7
5.3
7
100
0
74
56
13
0
29
1.37

Tables:   1

The End!