Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008015.1 Corchorus capsularis cultivar CVL-1 contig08036, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11559

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2725--2760
12
3.1
12
88
4
56
80
0
19
0
0.71
2718--2769
16
3.4
16
80
17
58
75
0
23
1
0.91
3895--4148
107
2.4
107
79
2
269
18
15
26
39
1.90
6010--6081
36
2.0
36
100
0
144
38
27
11
22
1.88
7575--7870
35
8.4
35
89
2
423
39
10
18
31
1.85
8596--8691
17
5.5
17
70
14
79
41
12
14
31
1.83
8582--9189
35
17.3
35
83
8
691
39
11
17
31
1.85
8814--9148
16
19.0
18
63
22
106
40
11
16
31
1.85
8823--9125
19
17.2
17
62
22
74
40
11
16
31
1.84
8588--9112
16
30.1
17
62
20
104
39
11
16
32
1.84

Tables:   1

The End!