Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008020.1 Corchorus capsularis cultivar CVL-1 contig08041, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50550

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2568--3045
35
13.7
35
90
4
664
38
10
17
33
1.83
21961--21990
2
15.0
2
100
0
60
50
0
0
50
1.00
25805--25857
27
2.0
27
96
0
97
22
18
18
39
1.92
39330--39368
2
19.0
2
94
5
69
48
2
0
48
1.15
43490--43514
1
25.0
1
100
0
50
0
100
0
0
0.00
50191--50227
2
18.5
2
100
0
74
48
0
0
51
1.00

Tables:   1

The End!