Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008027.1 Corchorus capsularis cultivar CVL-1 contig08048, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38064

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13--92
38
2.1
38
90
6
128
30
12
6
51
1.64
10885--10922
20
1.9
20
88
0
58
23
36
26
13
1.91
10898--10968
30
2.4
30
87
0
97
22
40
25
11
1.87
12800--12862
30
2.1
30
90
0
99
20
41
26
11
1.86
36028--36087
30
2.0
30
96
0
111
16
30
18
35
1.93
36028--36107
30
2.7
30
84
0
79
16
23
21
38
1.92

Tables:   1

The End!