Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008031.1 Corchorus capsularis cultivar CVL-1 contig08052, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23011

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4836--4868
15
2.2
15
89
10
50
63
0
0
36
0.95
5126--5173
14
3.4
14
72
16
53
27
16
10
45
1.80
6130--6200
35
2.0
35
100
0
142
28
19
33
18
1.95
10282--10331
13
3.6
14
84
13
59
48
12
10
30
1.73
11176--11343
87
1.9
87
85
0
228
38
8
24
28
1.85
11630--11733
47
2.2
47
98
0
199
28
15
31
24
1.95
12147--12312
35
4.6
34
78
8
143
25
17
15
41
1.88
12149--12346
37
5.4
36
77
9
154
26
16
14
42
1.87
12188--12346
74
2.2
73
85
4
205
25
15
15
42
1.87
12441--12560
62
2.0
59
83
8
152
41
17
7
33
1.77

Tables:   1

The End!