Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008035.1 Corchorus capsularis cultivar CVL-1 contig08056, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9964

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3325--3359
10
3.9
9
85
14
54
0
20
0
80
0.72
5275--5369
48
2.0
48
97
0
181
29
4
15
50
1.63
7641--7678
2
18.0
2
89
10
58
47
5
0
47
1.24
7641--7678
13
3.0
13
96
3
69
47
5
0
47
1.24
7707--7771
31
2.1
31
86
11
89
27
16
4
50
1.65
7800--7847
15
3.5
15
67
21
50
35
8
0
56
1.30
8542--8629
45
1.9
46
95
2
160
23
21
20
34
1.97
9617--9654
15
2.7
14
84
11
51
55
0
0
44
0.99
9617--9650
15
2.3
15
90
5
52
50
0
0
50
1.00

Tables:   1

The End!