Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008040.1 Corchorus capsularis cultivar CVL-1 contig08061, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11482

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1611--1686
38
2.0
38
92
0
125
27
27
5
39
1.78
2727--2832
53
2.0
53
100
0
212
15
24
13
47
1.81
5672--5751
29
2.7
30
82
9
92
37
18
17
26
1.93
6832--6856
13
1.9
13
100
0
50
16
4
40
40
1.67
10095--10137
18
2.4
18
96
0
77
34
13
23
27
1.93

Tables:   1

The End!