Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008042.1 Corchorus capsularis cultivar CVL-1 contig08063, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36703

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--33
2
16.5
2
100
0
66
48
0
0
51
1.00
1290--1318
3
9.7
3
100
0
58
34
31
34
0
1.58
1575--1617
3
14.7
3
90
4
70
34
2
0
62
1.08
7269--7307
20
2.0
20
84
0
51
46
7
2
43
1.46
16024--16060
19
2.0
18
89
5
56
29
21
8
40
1.82
16611--16690
41
2.0
40
87
7
117
15
12
21
51
1.75
21481--21531
21
2.5
20
84
9
66
56
9
9
23
1.61
25049--25097
17
2.9
17
79
17
57
36
12
8
42
1.72
26064--26203
74
1.9
74
92
2
237
40
7
29
22
1.82
26059--26215
74
2.1
74
88
2
235
40
8
28
22
1.84
26804--26852
18
2.7
18
78
9
55
65
0
14
20
1.27
30137--30162
12
2.2
12
100
0
52
30
0
23
46
1.53

Tables:   1

The End!