Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008045.1 Corchorus capsularis cultivar CVL-1 contig08066, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6700

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5003--5120
17
7.1
17
82
2
105
22
12
30
33
1.92
5035--5120
17
5.1
17
89
0
136
23
11
30
34
1.90
5003--5131
51
2.6
50
83
2
170
22
11
31
34
1.90
5003--5120
34
3.5
33
87
2
139
22
12
30
33
1.92
5932--5965
12
2.8
12
86
4
50
14
5
2
76
1.09
6014--6112
40
2.5
40
88
8
157
22
31
30
16
1.95
6362--6517
33
4.8
33
82
4
192
20
26
31
21
1.98
6398--6532
15
8.6
15
76
9
126
20
27
31
20
1.97
6359--6532
96
1.8
96
89
0
276
20
27
31
21
1.98
6367--6551
48
3.9
48
77
8
187
20
27
31
21
1.98
6508--6617
33
3.3
33
77
5
141
26
22
28
22
1.99
6429--6618
66
2.9
63
80
9
152
24
24
29
22
1.99
6412--6598
81
2.3
81
87
3
261
24
24
29
22
1.99
6508--6651
66
2.2
66
100
0
288
27
20
26
25
1.99
6535--6650
33
3.5
33
77
4
144
30
18
25
26
1.98

Tables:   1

The End!