Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008046.1 Corchorus capsularis cultivar CVL-1 contig08067, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10683

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
99--128
14
2.2
14
94
5
53
0
13
0
86
0.57
283--383
25
4.0
25
77
7
96
20
33
26
18
1.96
1519--1609
36
2.5
36
85
0
128
26
28
31
13
1.93
3431--3531
17
6.1
17
82
3
134
21
12
31
33
1.91
7236--7280
16
2.8
17
86
10
67
57
28
8
4
1.48
7491--7593
16
6.4
16
75
13
95
39
37
7
14
1.75
7491--7593
32
3.2
32
85
1
134
39
37
7
14
1.75
7495--7556
15
3.9
15
75
10
61
41
33
6
17
1.75
8605--8751
73
2.0
73
100
0
294
29
23
15
31
1.95
10045--10082
14
3.0
13
88
11
53
57
5
28
7
1.49

Tables:   1

The End!