Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008055.1 Corchorus capsularis cultivar CVL-1 contig08076, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22911

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2393--2430
19
2.0
19
85
10
51
39
13
5
42
1.66
3227--3297
25
2.8
25
73
21
67
47
9
2
39
1.51
3218--3352
55
2.6
51
88
7
182
45
10
4
39
1.58
3218--3377
51
2.9
53
83
7
171
46
8
5
40
1.57
6840--6969
62
2.1
62
91
0
206
48
0
12
39
1.41
7290--7315
2
13.0
2
100
0
52
50
0
0
50
1.00
8544--8579
17
2.1
17
89
0
54
55
5
22
16
1.62
8772--8809
11
3.5
11
89
10
51
39
0
2
57
1.12
9267--9305
20
2.0
20
84
0
51
58
5
2
33
1.33
10595--10628
18
1.9
18
88
5
52
47
17
0
35
1.48
12904--12981
33
2.4
33
82
4
95
14
29
41
15
1.86
14662--15781
333
3.5
319
79
8
1130
34
14
14
36
1.87
16517--17299
334
2.4
317
79
10
821
33
13
16
37
1.87
22447--22489
21
2.0
21
100
0
86
34
18
18
27
1.95

Tables:   1

The End!