Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008058.1 Corchorus capsularis cultivar CVL-1 contig08079, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40337

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2411--2519
52
2.1
52
96
3
202
24
4
18
52
1.64
2997--3093
48
2.1
47
88
3
142
38
10
5
46
1.60
4603--4654
23
2.1
24
82
10
61
34
9
1
53
1.45
5044--5104
31
2.0
31
83
0
77
36
13
21
29
1.91
12094--12163
29
2.4
30
86
11
92
15
32
15
35
1.90
12318--12424
29
3.6
30
79
6
119
38
14
28
19
1.90
24585--24627
17
2.6
16
85
10
59
20
23
20
34
1.96
27533--27597
33
2.0
33
100
0
130
15
16
21
46
1.84
33273--33297
13
1.9
13
100
0
50
76
8
0
16
1.02

Tables:   1

The End!