Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008061.1 Corchorus capsularis cultivar CVL-1 contig08082, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19906

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7479--7535
19
3.1
19
68
27
59
36
15
12
35
1.85
7477--7534
17
3.2
18
69
26
59
37
17
12
32
1.86
11449--11548
45
2.2
45
90
0
155
58
2
13
27
1.46
12524--12774
135
1.9
135
99
0
493
30
18
17
33
1.95
15622--15798
94
1.9
94
92
0
300
34
11
16
37
1.84
17047--17119
35
2.1
35
94
0
128
49
9
23
17
1.76
18440--18465
13
2.0
13
100
0
52
53
7
0
38
1.30
19368--19404
13
2.8
13
87
0
56
16
43
8
32
1.77
19783--19891
54
2.0
54
98
0
209
32
15
10
42
1.80

Tables:   1

The End!