Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008062.1 Corchorus capsularis cultivar CVL-1 contig08083, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68436

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14515--14548
14
2.4
14
90
0
59
35
0
61
2
1.11
19264--19303
2
20.0
2
94
0
71
50
2
0
47
1.14
22627--22677
25
2.0
25
100
0
102
49
7
11
31
1.68
41648--41702
20
2.8
20
91
2
94
49
7
30
12
1.68
41648--41699
19
2.7
20
93
3
88
48
7
32
11
1.68
41700--41815
60
1.9
59
87
1
169
42
10
12
35
1.76
42258--42326
33
2.1
33
100
0
138
49
5
2
42
1.41
43763--43819
28
2.1
28
86
3
80
24
7
8
59
1.52

Tables:   1

The End!