Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008074.1 Corchorus capsularis cultivar CVL-1 contig08095, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33042

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3586--3663
2
41.0
2
74
23
71
46
3
0
50
1.20
3588--3664
30
2.5
31
85
10
104
45
3
0
50
1.20
3586--3665
32
2.4
32
85
8
99
45
3
0
51
1.19
12774--12804
15
2.1
15
93
0
53
3
12
0
83
0.75
14117--14155
2
19.5
2
100
0
78
0
48
0
51
1.00
17106--17200
47
2.0
47
97
0
181
29
10
24
35
1.89
23561--23590
1
30.0
1
93
0
51
0
96
0
3
0.21
25197--25310
43
2.7
42
86
2
156
42
14
12
30
1.83
29080--29122
20
2.2
20
100
0
86
23
16
13
46
1.83

Tables:   1

The End!