Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008076.1 Corchorus capsularis cultivar CVL-1 contig08097, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35281

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3708--3738
16
1.9
16
93
0
53
29
12
6
51
1.65
3758--3832
32
2.4
33
86
10
104
22
5
9
62
1.45
4572--4600
12
2.4
12
100
0
58
27
13
34
24
1.93
11519--11562
21
2.1
21
84
16
56
52
4
36
6
1.49
12370--12771
201
2.0
201
100
0
804
32
12
18
36
1.88
24957--25022
30
2.2
30
83
5
80
19
37
9
33
1.84
30111--30135
13
1.9
13
100
0
50
32
16
0
52
1.44

Tables:   1

The End!