Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008078.1 Corchorus capsularis cultivar CVL-1 contig08099, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12535

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
337--379
16
2.7
16
88
0
59
4
16
44
34
1.68
320--389
16
4.3
16
73
8
52
2
18
48
30
1.62
610--1658
334
3.1
333
84
4
1315
33
13
16
36
1.87
1665--5757
334
12.3
334
85
3
5463
31
14
17
36
1.90
6246--6394
69
2.1
71
96
2
275
34
4
14
46
1.64
11055--11127
29
2.5
29
77
2
83
43
12
20
23
1.85
12412--12488
30
2.6
30
83
6
95
16
36
11
35
1.86

Tables:   1

The End!