Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008090.1 Corchorus capsularis cultivar CVL-1 contig08111, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28197

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
378--470
48
2.0
45
89
6
141
34
11
17
36
1.86
6727--7520
420
1.9
419
83
3
1024
40
13
15
30
1.86
10646--10717
17
3.8
18
77
21
76
61
19
8
11
1.54
10661--10724
22
3.1
22
66
25
66
59
20
6
14
1.56
19112--19144
3
11.0
3
100
0
66
66
0
0
33
0.92
19257--19282
13
2.0
13
100
0
52
23
0
23
53
1.46
19511--19544
2
17.5
2
87
6
52
50
2
0
47
1.16
19681--19710
2
15.5
2
93
6
53
50
0
0
50
1.00

Tables:   1

The End!