Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008092.1 Corchorus capsularis cultivar CVL-1 contig08113, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4300

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--824
365
2.3
364
92
1
1341
32
15
14
36
1.88
475--1698
322
3.7
325
88
4
1607
32
15
15
36
1.88
1702--1741
21
1.9
21
100
0
80
47
0
17
35
1.48
1703--1741
11
3.6
11
93
6
71
46
0
17
35
1.49
1832--4298
663
3.8
662
74
11
2016
36
15
14
33
1.89
1832--3462
332
4.9
331
81
5
1888
35
15
14
33
1.89
3562--4280
330
2.2
331
90
3
1126
36
16
14
33
1.88

Tables:   1

The End!