Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008103.1 Corchorus capsularis cultivar CVL-1 contig08124, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5174

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
398--498
36
2.8
36
92
5
161
27
16
7
47
1.75
507--772
36
7.5
35
79
7
290
25
21
9
42
1.83
507--771
107
2.5
105
83
3
325
26
21
9
42
1.84
507--772
71
3.8
69
83
6
295
25
21
9
42
1.83
765--834
33
2.1
33
89
0
104
24
18
10
47
1.79
775--882
11
9.6
11
75
7
83
21
19
12
47
1.81
850--887
11
3.4
11
82
17
51
7
23
10
57
1.58
949--1105
35
4.1
35
78
16
170
27
11
10
50
1.70
958--1051
46
2.1
45
91
2
152
29
10
7
52
1.63
2127--2151
9
2.8
9
100
0
50
0
16
0
84
0.63
2125--2156
11
3.1
11
82
17
50
0
18
0
81
0.70

Tables:   1

The End!