Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008109.1 Corchorus capsularis cultivar CVL-1 contig08130, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66498

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
524--623
19
5.4
19
70
10
73
49
23
14
14
1.79
497--628
28
4.8
28
94
0
221
45
24
14
15
1.84
524--623
9
10.7
10
70
13
79
49
23
14
14
1.79
1509--1559
21
2.4
21
80
6
59
23
3
5
66
1.30
8671--8700
6
5.2
6
96
4
53
30
0
16
53
1.44
13126--13173
20
2.3
20
82
3
60
16
8
8
66
1.42
14418--14531
59
1.9
59
92
0
192
47
8
11
32
1.70
14256--14488
122
2.0
121
88
4
357
51
11
9
28
1.68
15172--15212
2
20.5
2
84
0
55
51
2
0
46
1.14
15559--15594
19
1.9
18
88
5
54
41
2
22
33
1.68
31840--31880
21
2.0
21
90
0
64
43
14
29
12
1.82
33407--33440
16
2.2
16
89
5
52
58
8
2
29
1.43
34717--34752
19
1.9
18
88
5
54
33
22
2
41
1.68
40992--41025
11
3.2
10
84
15
50
50
17
2
29
1.61
51370--51429
29
2.0
30
87
3
86
28
11
5
55
1.57

Tables:   1

The End!