Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008113.1 Corchorus capsularis cultivar CVL-1 contig08134, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18277

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1374--1464
42
2.2
42
97
0
173
14
52
23
9
1.71
4843--4877
13
2.7
13
95
0
61
20
11
8
60
1.57
6949--7287
49
6.9
49
82
3
342
33
16
28
21
1.96
8685--8737
17
3.2
17
71
17
58
47
20
15
16
1.83
11602--11639
19
2.1
18
90
5
58
31
21
2
44
1.66
11590--11646
19
2.8
21
74
20
57
33
19
3
43
1.68
14567--14607
15
2.7
15
96
0
73
7
26
21
43
1.79
16055--16085
6
5.3
6
96
3
55
51
12
0
35
1.40
17442--17473
11
2.9
11
90
0
55
43
18
0
37
1.51
17419--17473
19
2.6
22
75
21
64
40
18
1
40
1.61

Tables:   1

The End!