Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008119.1 Corchorus capsularis cultivar CVL-1 contig08140, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9546

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57--81
2
12.5
2
100
0
50
52
48
0
0
1.00
81--114
2
17.0
2
100
0
68
50
0
0
50
1.00
4219--4281
24
2.8
22
79
9
63
14
17
3
65
1.40
4770--4801
11
2.9
11
95
0
55
46
6
6
40
1.54
6220--6581
156
2.3
155
80
8
405
31
14
18
34
1.92
6933--6965
17
1.9
17
100
0
66
30
36
6
27
1.81
7114--7154
21
2.0
21
90
0
64
34
31
12
21
1.91
7281--7329
3
16.7
3
95
4
91
32
0
0
67
0.91

Tables:   1

The End!