Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008120.1 Corchorus capsularis cultivar CVL-1 contig08141, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24508

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4654--4690
1
37.0
1
94
0
65
97
0
2
0
0.18
10429--10458
7
4.3
7
100
0
60
16
26
30
26
1.97
10744--10792
15
2.9
18
75
25
54
61
0
6
32
1.21
10834--10866
13
2.5
13
95
0
57
63
0
3
33
1.10
12227--12318
31
3.0
30
84
6
121
30
17
7
44
1.76
12299--12604
152
2.0
152
93
3
528
37
10
2
49
1.50
12627--12721
37
2.6
37
81
0
127
15
17
11
54
1.70
15624--15667
23
1.9
23
86
9
63
4
34
15
45
1.67
17183--17216
16
2.1
17
88
5
52
5
23
0
70
1.09
17235--17261
13
2.1
13
100
0
54
0
29
0
70
0.88
17234--17262
15
2.0
15
93
6
51
0
31
0
68
0.89
20656--20686
16
1.9
16
100
0
62
22
12
25
38
1.90

Tables:   1

The End!