Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008123.1 Corchorus capsularis cultivar CVL-1 contig08144, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44863

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1367--1393
13
2.1
13
100
0
54
0
33
14
51
1.43
6479--6631
76
2.0
76
100
0
306
31
18
17
32
1.94
6691--6768
39
2.0
39
100
0
156
17
17
28
35
1.94
6946--6973
2
14.0
2
100
0
56
50
0
0
50
1.00
7149--7178
2
15.0
2
100
0
60
50
0
0
50
1.00
26801--26825
13
1.9
13
100
0
50
20
40
8
32
1.81
26788--26912
60
2.1
60
92
0
205
16
28
5
48
1.69
32951--32977
2
13.5
2
100
0
54
51
0
0
48
1.00
34343--34374
16
2.0
16
100
0
64
31
25
12
31
1.92
34486--34559
23
3.2
23
63
14
62
44
6
14
33
1.72
34468--34561
46
2.0
46
100
0
188
45
7
12
34
1.70
40877--40918
20
2.1
20
86
8
59
33
2
19
45
1.63
40956--40989
17
2.0
17
100
0
68
35
17
35
11
1.87

Tables:   1

The End!