Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008125.1 Corchorus capsularis cultivar CVL-1 contig08146, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34408

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2411--2439
15
1.9
15
100
0
58
6
17
41
34
1.76
9172--9204
17
1.9
17
93
0
57
72
6
9
12
1.26
15066--15091
2
13.0
2
100
0
52
50
0
0
50
1.00
20221--20290
18
3.9
18
73
0
59
18
55
12
12
1.68
20257--20322
27
2.4
27
92
0
105
21
53
10
15
1.72
21432--21462
1
31.0
1
100
0
62
100
0
0
0
0.00
24893--24945
27
1.9
27
84
3
70
32
0
0
67
0.91
24975--25037
31
2.0
31
93
0
108
38
12
12
36
1.82
27128--27182
24
2.3
24
84
9
69
67
1
16
14
1.32
28100--28147
21
2.4
20
89
6
71
31
8
20
39
1.82
29301--29358
30
1.9
31
85
3
82
43
6
12
37
1.69
29653--29690
2
19.0
2
100
0
76
0
50
0
50
1.00
34045--34105
30
2.0
30
84
6
79
14
21
21
42
1.88

Tables:   1

The End!