Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008133.1 Corchorus capsularis cultivar CVL-1 contig08154, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14006

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5376--5434
2
29.5
2
100
0
118
50
49
0
0
1.00
5434--5465
2
16.0
2
100
0
64
50
0
0
50
1.00
5886--5962
41
1.9
41
81
7
95
53
20
10
15
1.71
6322--6366
20
2.6
18
78
21
51
33
17
8
40
1.81
6844--6899
28
2.0
28
92
0
94
30
12
30
26
1.93
7377--7401
12
2.1
12
100
0
50
24
8
24
44
1.80
10070--10218
74
2.0
74
94
0
262
19
25
30
24
1.98
12379--12415
1
37.0
1
100
0
74
100
0
0
0
0.00

Tables:   1

The End!