Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008135.1 Corchorus capsularis cultivar CVL-1 contig08156, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18268

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1050--1098
22
2.2
22
89
7
73
34
2
4
59
1.28
1898--2308
22
19.0
21
68
14
133
35
17
9
37
1.83
2141--2244
46
2.3
46
85
6
133
39
13
8
38
1.75
2143--2244
23
4.5
24
83
8
108
40
13
7
38
1.74
2143--2266
45
2.7
43
80
12
124
38
14
8
37
1.77
2368--2422
22
2.5
22
85
5
67
43
9
9
38
1.68
2547--2651
22
4.8
22
72
10
81
33
12
9
44
1.74
2522--2650
44
2.9
44
73
13
129
33
12
10
44
1.76
2824--2888
31
2.1
31
88
5
96
44
4
20
30
1.71
6194--6241
23
2.0
24
84
4
62
45
4
4
45
1.41

Tables:   1

The End!