Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008139.1 Corchorus capsularis cultivar CVL-1 contig08160, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33139

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6828--6945
37
3.2
37
89
4
177
46
7
19
26
1.76
6915--7068
71
2.2
71
83
0
191
42
7
21
27
1.80
7057--7430
41
9.1
41
91
0
586
41
11
18
28
1.85
7427--7736
37
8.8
37
79
12
357
44
12
19
23
1.85
7491--7755
103
2.6
103
88
3
399
44
12
19
24
1.85
7751--7954
40
5.1
40
84
8
258
46
10
18
25
1.81
7713--7991
77
3.6
75
82
10
303
45
10
18
25
1.82
8083--8261
37
4.8
37
95
1
297
39
7
27
25
1.82
8254--8325
32
2.2
32
97
0
135
36
9
23
30
1.87
8271--8456
37
5.2
35
85
7
200
36
10
24
28
1.89
8303--8456
37
4.2
37
89
2
215
36
11
24
27
1.89
9261--9343
21
3.8
21
70
20
64
55
0
4
39
1.21
18938--19004
21
3.2
21
70
16
66
26
11
26
34
1.91
19321--19363
21
2.0
21
82
8
52
30
20
2
46
1.63
29114--29154
20
2.0
21
95
4
75
39
29
17
14
1.89

Tables:   1

The End!