Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008141.1 Corchorus capsularis cultivar CVL-1 contig08162, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17436

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1714--1754
13
3.2
13
89
0
55
26
41
17
14
1.88
1750--1859
54
2.0
54
98
0
211
34
36
6
22
1.80
13132--13213
41
2.1
39
83
4
101
52
3
9
34
1.52
14480--14692
115
1.9
115
85
2
302
25
15
26
31
1.96
15101--15134
11
3.2
10
84
15
50
50
17
2
29
1.61
15286--15324
20
1.9
21
84
5
53
58
7
17
15
1.59

Tables:   1

The End!