Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008143.1 Corchorus capsularis cultivar CVL-1 contig08164, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37079

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4685--4724
21
1.9
21
89
0
62
42
10
7
40
1.67
9116--9151
18
2.1
17
94
5
63
11
16
8
63
1.49
10101--10155
15
3.7
15
85
0
65
14
21
23
40
1.90
10108--10203
30
3.2
30
77
0
102
12
22
25
39
1.89
10124--10219
45
2.1
45
90
0
147
12
21
25
40
1.88
10108--10203
15
6.4
15
76
0
84
12
22
25
39
1.89
10847--10881
15
2.4
14
86
9
52
77
0
22
0
0.78
13325--13354
15
2.0
15
93
0
51
80
3
6
10
1.01
16735--16814
35
2.3
35
93
4
137
47
7
10
35
1.65
18256--18289
11
3.2
10
84
15
50
50
17
2
29
1.61
20023--20124
31
3.3
31
84
0
123
18
22
26
32
1.97
20074--20176
53
1.9
53
84
0
134
17
18
26
37
1.93
32992--33016
10
2.5
10
100
0
50
40
24
8
28
1.83

Tables:   1

The End!