Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008148.1 Corchorus capsularis cultivar CVL-1 contig08169, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17339

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4222--4281
28
2.1
28
93
0
102
10
10
21
58
1.60
5035--5108
32
2.3
32
90
2
114
47
29
14
8
1.73
5036--5089
16
3.4
16
80
10
74
48
33
12
5
1.65
7932--8016
32
2.7
32
88
3
118
23
11
30
34
1.91
8179--8217
20
2.0
20
89
0
60
38
5
2
53
1.37
8592--8631
2
20.5
2
85
14
57
47
2
0
50
1.14
12923--12990
27
2.5
27
81
9
77
33
23
13
29
1.93

Tables:   1

The End!