Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008149.1 Corchorus capsularis cultivar CVL-1 contig08170, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86288

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13397--13637
81
3.0
80
87
3
338
35
4
29
31
1.76
15516--15553
7
5.4
7
90
9
60
84
0
15
0
0.63
15517--15545
13
2.2
13
100
0
58
86
0
13
0
0.58
15507--15549
17
2.6
16
85
14
52
83
2
13
0
0.74
15996--16063
33
2.1
33
100
0
136
26
26
14
32
1.95
17792--17853
30
2.1
30
100
0
124
40
16
16
27
1.89
19672--19714
12
3.5
12
93
6
77
34
16
23
25
1.95
25804--25916
56
2.0
56
94
0
199
35
17
15
30
1.92
37139--37178
19
2.1
19
100
0
80
55
25
10
10
1.64
40866--40890
1
25.0
1
100
0
50
0
0
0
100
0.00
47576--47655
40
2.0
40
92
0
133
37
8
21
32
1.84
50423--50492
35
2.0
35
97
0
131
45
12
20
21
1.84
69876--69947
31
2.3
31
73
4
74
26
5
11
56
1.55
72282--72311
15
2.0
15
100
0
60
26
26
33
13
1.93
79458--79497
21
1.9
21
90
10
64
40
12
25
22
1.89

Tables:   1

The End!