Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008155.1 Corchorus capsularis cultivar CVL-1 contig08176, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21624

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12554--12586
11
3.2
11
91
8
52
48
6
0
45
1.27
12938--12979
15
2.7
15
80
16
50
40
33
14
11
1.82
15128--15347
108
2.0
108
100
0
440
23
13
22
40
1.89
16795--16874
33
2.5
32
79
4
88
25
36
28
10
1.88
17860--17893
8
4.1
8
85
7
50
58
14
2
23
1.50
17966--17999
9
3.7
9
92
7
59
85
0
0
14
0.60
17967--17999
5
7.0
5
86
13
52
84
0
0
15
0.61

Tables:   1

The End!