Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008160.1 Corchorus capsularis cultivar CVL-1 contig08181, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19243

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
846--886
1
41.0
1
100
0
82
0
0
0
100
0.00
3847--3881
17
2.0
18
94
5
63
28
28
8
34
1.87
4025--4065
21
2.0
21
100
0
82
31
34
14
19
1.92
4277--4440
55
3.0
55
85
4
222
21
26
18
33
1.96
12462--12488
6
4.5
6
100
0
54
55
14
0
29
1.40
19069--19118
23
2.3
22
75
6
57
36
12
4
48
1.59

Tables:   1

The End!