Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008162.1 Corchorus capsularis cultivar CVL-1 contig08183, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1187

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43--112
35
2.0
35
88
5
106
34
24
25
15
1.95
22--1187
41
28.8
41
75
9
856
37
21
25
14
1.92
365--1072
249
2.9
240
84
6
926
37
22
25
14
1.92
19--835
370
2.2
368
89
3
1248
37
21
25
15
1.92
20--932
370
2.5
369
86
3
1189
37
21
26
15
1.92
78--1187
81
13.6
81
74
10
784
37
21
25
14
1.92

Tables:   1

The End!