Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008163.1 Corchorus capsularis cultivar CVL-1 contig08184, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31005

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7928--7988
25
2.5
26
76
15
67
55
1
4
37
1.31
8008--8040
13
2.6
13
90
4
50
33
3
12
51
1.54
17974--18027
23
2.5
20
80
11
63
61
3
24
11
1.46
18546--18592
9
5.6
8
76
18
51
76
2
21
0
0.89
26459--26678
104
2.1
104
86
5
300
42
9
7
40
1.65
28584--28647
16
3.9
17
76
12
62
15
10
35
37
1.83
28581--28653
17
4.4
17
74
10
71
13
9
36
39
1.78
28794--28852
16
3.7
16
83
0
82
8
13
27
50
1.70

Tables:   1

The End!