Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008170.1 Corchorus capsularis cultivar CVL-1 contig08191, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25899

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2520--2670
81
1.9
81
95
0
275
31
12
23
32
1.92
5912--6160
130
1.9
128
87
3
365
36
11
1
49
1.49
8199--8243
16
2.8
17
83
6
58
37
0
2
60
1.09
12044--12068
13
1.9
13
100
0
50
40
8
0
52
1.31
15503--15579
33
2.3
33
97
0
145
19
41
27
11
1.86
19748--19774
14
1.9
14
100
0
54
22
0
37
40
1.54
25488--25587
31
3.3
31
76
5
105
31
21
12
36
1.89

Tables:   1

The End!