Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008172.1 Corchorus capsularis cultivar CVL-1 contig08193, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33832

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2712--2807
48
2.0
48
100
0
192
29
12
12
45
1.78
16432--16456
13
1.9
13
100
0
50
0
12
0
88
0.53
17995--18046
26
2.0
26
85
7
70
7
42
40
9
1.66
18685--18727
22
2.0
22
85
0
59
48
2
0
48
1.14
18684--18734
24
2.1
24
81
0
57
50
1
0
47
1.12
19987--20186
41
4.7
43
80
9
207
40
25
12
21
1.88
19987--20227
84
2.9
82
84
5
288
41
25
12
21
1.87
20082--20219
41
3.3
42
71
11
122
44
23
9
23
1.82
24003--24038
10
3.6
10
100
0
72
61
0
19
19
1.35
28329--28353
10
2.5
10
100
0
50
48
20
8
24
1.76

Tables:   1

The End!