Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008176.1 Corchorus capsularis cultivar CVL-1 contig08197, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9134

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5292--5460
31
5.5
31
87
0
185
17
21
27
33
1.96
5289--5460
93
1.8
93
84
0
236
17
22
26
33
1.96
8224--8295
32
2.3
31
79
6
83
8
15
25
51
1.71
8237--8288
16
3.2
16
73
13
52
9
17
21
51
1.73
8237--8303
32
2.1
32
83
5
82
10
13
22
53
1.69

Tables:   1

The End!