Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008177.1 Corchorus capsularis cultivar CVL-1 contig08198, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33100

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3601--3634
8
4.1
8
85
7
50
23
2
14
58
1.50
3757--3863
33
3.2
34
84
6
96
9
28
40
22
1.85
4967--5000
8
4.1
8
85
7
50
23
2
14
58
1.50
10659--10696
19
2.0
19
89
0
58
28
7
0
63
1.23
13000--13106
33
3.2
32
85
5
126
8
28
39
23
1.84
13463--13509
24
2.0
24
83
8
60
14
14
4
65
1.41
13789--13815
11
2.5
11
100
0
54
11
0
29
59
1.32
20045--20118
33
2.2
34
83
7
107
13
27
36
22
1.92
27426--27497
31
2.4
31
88
2
101
33
22
15
29
1.94
30248--30276
6
4.8
6
100
0
58
0
65
0
34
0.93

Tables:   1

The End!