Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008183.1 Corchorus capsularis cultivar CVL-1 contig08204, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8214

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
747--1233
166
2.9
163
81
6
586
39
16
14
28
1.88
2713--2752
20
2.0
20
90
0
62
37
20
20
22
1.94
4191--4255
14
4.8
13
87
9
94
36
10
13
38
1.80
4192--4255
27
2.3
28
94
2
112
37
10
14
37
1.81
4247--4518
22
12.5
22
72
10
141
43
8
14
33
1.77
4618--5180
22
25.7
22
68
15
179
39
9
14
36
1.78
4618--4912
66
4.5
63
73
13
226
41
8
13
36
1.75
5423--5485
16
3.8
17
73
12
60
12
14
36
36
1.84
5646--5689
16
2.7
17
86
6
56
6
18
27
47
1.73
7061--7095
2
17.5
2
100
0
70
48
0
0
51
1.00

Tables:   1

The End!