Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008184.1 Corchorus capsularis cultivar CVL-1 contig08205, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19091

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5891--5973
30
2.8
30
88
3
123
36
22
20
20
1.95
9730--9809
30
2.7
30
92
0
124
16
25
22
36
1.94
11829--11969
33
4.3
33
80
4
124
9
27
39
23
1.86
13289--13374
33
2.6
33
90
0
136
44
17
5
32
1.73
13389--13485
33
2.9
33
79
0
113
43
19
10
26
1.83
15135--15225
33
2.8
33
86
3
121
8
25
41
24
1.83
15206--15279
33
2.2
33
88
4
105
13
28
39
18
1.89
17072--17155
33
2.5
33
88
0
123
45
14
7
33
1.72
18934--19024
33
2.8
33
86
3
121
8
25
41
24
1.83
19005--19078
33
2.2
33
88
4
105
13
28
39
18
1.89

Tables:   1

The End!