Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000819.1 Corchorus capsularis cultivar CVL-1 contig00819, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1217

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--92
15
5.9
14
67
27
58
19
23
4
52
1.64
62--165
35
2.9
36
78
8
113
19
23
1
55
1.53
139--506
7
51.6
7
65
13
85
19
23
2
55
1.54
139--329
35
5.3
35
78
11
111
19
22
1
56
1.51
173--334
76
2.1
75
88
1
243
18
22
1
57
1.48
244--361
35
3.4
33
83
10
121
17
22
2
56
1.53
380--506
35
3.5
35
85
7
166
16
25
2
55
1.53
674--857
40
4.6
40
72
8
149
24
19
5
50
1.68
671--859
80
2.3
79
85
4
252
24
20
5
49
1.69

Tables:   1

The End!