Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008190.1 Corchorus capsularis cultivar CVL-1 contig08211, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20020

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3240--3303
33
1.9
33
100
0
128
48
21
14
15
1.80
6160--6189
2
15.5
2
93
6
53
50
0
0
50
1.00
11682--11816
44
3.1
44
86
6
175
33
13
8
45
1.73
11928--11973
16
2.7
18
75
21
53
15
6
4
73
1.19
17322--17451
61
2.1
63
84
4
165
33
16
33
16
1.92
17553--17579
2
13.5
2
100
0
54
51
0
0
48
1.00
19635--19669
13
2.7
13
95
0
61
20
11
8
60
1.57
19666--19692
6
4.5
6
100
0
54
29
0
14
55
1.40

Tables:   1

The End!