Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008191.1 Corchorus capsularis cultivar CVL-1 contig08212, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17746

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
573--598
10
2.6
10
100
0
52
23
7
19
50
1.73
11090--11147
29
2.0
28
83
12
73
46
10
15
27
1.78
11251--11301
26
1.9
27
92
4
86
45
21
13
19
1.85
12598--12653
29
1.9
29
88
0
85
30
12
16
41
1.85
13040--13079
20
2.0
20
100
0
80
20
5
15
60
1.53
13164--13244
34
2.4
34
89
0
117
35
14
13
35
1.86
13158--13278
34
3.6
33
82
5
111
34
15
14
34
1.89

Tables:   1

The End!